[Flexiblesusy-commits] [FlexibleSUSY/FlexibleSUSY] ff4d3a: implement CKM matrix struct in Wolfenstein paramet...

GitHub noreply at github.com
Fri Apr 17 17:14:19 BST 2015


  Branch: refs/heads/development
  Home:   https://github.com/FlexibleSUSY/FlexibleSUSY
  Commit: ff4d3a5259f22d36008e7faee7f682ef6804d036
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/ff4d3a5259f22d36008e7faee7f682ef6804d036
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-10-15 (Wed, 15 Oct 2014)

  Changed paths:
    A src/ckm.cpp
    A src/ckm.hpp
    M src/ew_input.hpp
    M src/module.mk

  Log Message:
  -----------
  implement CKM matrix struct in Wolfenstein parametrization


  Commit: 192100c9db809ea37249f46cca37f603a0a5b0f3
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/192100c9db809ea37249f46cca37f603a0a5b0f3
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-10-15 (Wed, 15 Oct 2014)

  Changed paths:
    M src/ckm.cpp
    M src/ckm.hpp

  Log Message:
  -----------
  put initialization from CKM angles into separate function


  Commit: b0459fadc04c5b318ad7b3d0109d654e80410271
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/b0459fadc04c5b318ad7b3d0109d654e80410271
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-10-16 (Thu, 16 Oct 2014)

  Changed paths:
    M src/ckm.cpp
    M src/ckm.hpp

  Log Message:
  -----------
  parametrize CKM matrix in terms of theta_12, theta_13, theta_23 and delta


  Commit: 05969493fea5511f96fb62ea9a38f0c350f635b4
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/05969493fea5511f96fb62ea9a38f0c350f635b4
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-10-16 (Thu, 16 Oct 2014)

  Changed paths:
    M src/ckm.cpp
    M src/ckm.hpp
    M src/wrappers.hpp

  Log Message:
  -----------
  add CKM matrix getter functions


  Commit: c2aefe3678bd33e3963bb2931bf9c161be0c6008
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/c2aefe3678bd33e3963bb2931bf9c161be0c6008
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-10-16 (Thu, 16 Oct 2014)

  Changed paths:
    M src/lowe.h

  Log Message:
  -----------
  add CKM matrix to low-energy class


  Commit: 2a7212df212ee0740580ce1727f7f220e53adfb7
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/2a7212df212ee0740580ce1727f7f220e53adfb7
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-10-16 (Thu, 16 Oct 2014)

  Changed paths:
    M src/lowe.h

  Log Message:
  -----------
  trim whitespace


  Commit: c676afb95adc2b772559295477e25e647fe461ad
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/c676afb95adc2b772559295477e25e647fe461ad
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-10-16 (Thu, 16 Oct 2014)

  Changed paths:
    M src/ckm.cpp
    M src/ckm.hpp

  Log Message:
  -----------
  add reset() function to CKM parameters struct


  Commit: 001e08880e350a41460a28d8873dc529bb03ad66
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/001e08880e350a41460a28d8873dc529bb03ad66
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-10-16 (Thu, 16 Oct 2014)

  Changed paths:
    M src/lowe.h

  Log Message:
  -----------
  add getter for CKM parameters


  Commit: 17d68a733222c84383b63a0fec351a7e423dbbef
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/17d68a733222c84383b63a0fec351a7e423dbbef
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-10-16 (Thu, 16 Oct 2014)

  Changed paths:
    M src/slha_io.cpp
    M src/slha_io.hpp

  Log Message:
  -----------
  read CKM wolfenstein parameters from VCKMIN


  Commit: 02c70567fed1968c1ed2f76a92fbcd9d19923bb7
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/02c70567fed1968c1ed2f76a92fbcd9d19923bb7
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-10-16 (Thu, 16 Oct 2014)

  Changed paths:
    M src/ckm.cpp

  Log Message:
  -----------
  add protection against division by zero


  Commit: 00436bfcc97949837bd69544d94de995ad1226cd
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/00436bfcc97949837bd69544d94de995ad1226cd
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-10-16 (Thu, 16 Oct 2014)

  Changed paths:
    M src/ckm.cpp

  Log Message:
  -----------
  protection against division by zero


  Commit: bdbe1963a85169984bf8c2bb002bb1abd0db903a
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/bdbe1963a85169984bf8c2bb002bb1abd0db903a
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-10-16 (Thu, 16 Oct 2014)

  Changed paths:
    M src/lowe.cpp
    M src/lowe.h

  Log Message:
  -----------
  properly initialize and copy CKM matrix parameters in QedQcd


  Commit: f945568bf6ca97566a200bcef352e4b5ef278ce0
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/f945568bf6ca97566a200bcef352e4b5ef278ce0
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-10-16 (Thu, 16 Oct 2014)

  Changed paths:
    M models/SoftsusyMSSM/module.mk
    M models/SoftsusyNMSSM/module.mk

  Log Message:
  -----------
  add Eigen CPPFLAGS to compilation command for Softsusy models


  Commit: e710f89f9e9dad6aa192d7f19a3e690f9d2cd49f
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/e710f89f9e9dad6aa192d7f19a3e690f9d2cd49f
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-10-16 (Thu, 16 Oct 2014)

  Changed paths:
    M src/ckm.cpp
    M src/ckm.hpp

  Log Message:
  -----------
  set CKM angles to zero by default to reproduce std behaviour


  Commit: bbffa909641fcd151e4b3cbfef6b5d49c2c11454
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/bbffa909641fcd151e4b3cbfef6b5d49c2c11454
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-10-16 (Thu, 16 Oct 2014)

  Changed paths:
    M src/ckm.cpp

  Log Message:
  -----------
  add assertions for Wolfenstein parameter ranges


  Commit: bbd7a52e01ef4fcb95a6bb67eccb475001f06a99
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/bbd7a52e01ef4fcb95a6bb67eccb475001f06a99
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-10-16 (Thu, 16 Oct 2014)

  Changed paths:
    M templates/two_scale_low_scale_constraint.cpp.in

  Log Message:
  -----------
  apply CKM matrix rotation on up-type quarks


  Commit: c630b21278600de28dba666334f77afaf2683f4d
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/c630b21278600de28dba666334f77afaf2683f4d
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-10-16 (Thu, 16 Oct 2014)

  Changed paths:
    M model_files/MSSM/LesHouches.in.MSSM

  Log Message:
  -----------
  add VCKMIN example block (commented out to reproduce std behaviour)


  Commit: d3368c0f7bc21e650d43f7dace272286e7bc4013
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/d3368c0f7bc21e650d43f7dace272286e7bc4013
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-10-16 (Thu, 16 Oct 2014)

  Changed paths:
    A models/SoftsusyFlavourMSSM/flavoursoft.cpp
    A models/SoftsusyFlavourMSSM/flavoursoft.h
    A models/SoftsusyFlavourMSSM/module.mk

  Log Message:
  -----------
  add Softsusy's flavour MSSM model


  Commit: 9c480e4ef15e2169554d6ef0cee804ce008fa570
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/9c480e4ef15e2169554d6ef0cee804ce008fa570
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-10-16 (Thu, 16 Oct 2014)

  Changed paths:
    M test/module.mk
    M test/test_MSSM_low_scale_constraint.cpp

  Log Message:
  -----------
  add test to check CKM matrix influence on the Yukawa couplinges


  Commit: 320f12961706623a0366287895a6d3c79b7f4d60
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/320f12961706623a0366287895a6d3c79b7f4d60
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-10-16 (Thu, 16 Oct 2014)

  Changed paths:
    M meta/FlexibleSUSY.m

  Log Message:
  -----------
  add general replacement rules for SARAH-defined symbols


  Commit: 3af19fea645c1254f673e4b30077bf2068df7f7a
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/3af19fea645c1254f673e4b30077bf2068df7f7a
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-10-16 (Thu, 16 Oct 2014)

  Changed paths:
    M templates/slha_io.hpp.in

  Log Message:
  -----------
  write real part of CKM matrix to SLHA file


  Commit: 482799f7ab09f13255f982b97b727fcfed3e8f0c
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/482799f7ab09f13255f982b97b727fcfed3e8f0c
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-10-16 (Thu, 16 Oct 2014)

  Changed paths:
    M templates/slha_io.hpp.in

  Log Message:
  -----------
  write imaginary part of CKM matrix to SLHA file


  Commit: 162be51aa5dc6f3a881533772ae586cac935ae96
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/162be51aa5dc6f3a881533772ae586cac935ae96
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-10-16 (Thu, 16 Oct 2014)

  Changed paths:
    M src/wrappers.hpp

  Log Message:
  -----------
  add rounding function


  Commit: ddadf04640a539a38658c770e525fd24464c04b7
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/ddadf04640a539a38658c770e525fd24464c04b7
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-10-16 (Thu, 16 Oct 2014)

  Changed paths:
    M src/slha_io.cpp
    M src/slha_io.hpp
    M templates/slha_io.hpp.in

  Log Message:
  -----------
  read MODSEL flavour violation switch


  Commit: 9aba4c8145384bf9e13e0e319bc822c6a52be123
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/9aba4c8145384bf9e13e0e319bc822c6a52be123
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-10-16 (Thu, 16 Oct 2014)

  Changed paths:
    M examples/customized-betas/LesHouches.in.MSSMcbs
    M examples/tower/LesHouches.in.tower
    M model_files/E6SSM/LesHouches.in.E6SSM
    M model_files/MSSM/LesHouches.in.MSSM
    M model_files/NMSSM/LesHouches.in.NMSSM
    M model_files/NUHMSSM/LesHouches.in.NUHMSSM
    M model_files/UMSSM/LesHouches.in.UMSSM

  Log Message:
  -----------
  add supported MODSEL flavour violation option 6


  Commit: 62483ed5b6a8c0cdbb52ac065b900215069abdb8
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/62483ed5b6a8c0cdbb52ac065b900215069abdb8
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-10-16 (Thu, 16 Oct 2014)

  Changed paths:
    M model_files/MSSM/LesHouches.in.MSSM

  Log Message:
  -----------
  remove redundant SLHA input file entry


  Commit: 95b441806f28ba2e53990a35c02b6418becf476d
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/95b441806f28ba2e53990a35c02b6418becf476d
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-10-16 (Thu, 16 Oct 2014)

  Changed paths:
    M src/wrappers.hpp

  Log Message:
  -----------
  consider correct sign in rounding function


  Commit: c7b18b74108f3b0978dbdf01d63d534faf1d3cf7
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/c7b18b74108f3b0978dbdf01d63d534faf1d3cf7
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-10-16 (Thu, 16 Oct 2014)

  Changed paths:
    M src/slha_io.cpp

  Log Message:
  -----------
  simplify reading of flavour violation SLHA switch


  Commit: 0b8399674e9f3667df81fde0e3bd7c58313e657c
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/0b8399674e9f3667df81fde0e3bd7c58313e657c
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-10-16 (Thu, 16 Oct 2014)

  Changed paths:
    M test/test_MSSM_low_scale_constraint.cpp

  Log Message:
  -----------
  relax test precision on the flavour mixing Yukawa couplings

I checked that the difference in the Yukawa couplings (including
flavour mixing) between Softsusy and FlexibleSUSY stems only from
the different VEV used (see the comment in the code).


  Commit: c4b1fabc10bbb13c6ccdca911f3c036fe90c583c
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/c4b1fabc10bbb13c6ccdca911f3c036fe90c583c
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-10-16 (Thu, 16 Oct 2014)

  Changed paths:
    M ChangeLog

  Log Message:
  -----------
  update ChangeLog


  Commit: 8fa359f598c6ca3c73c7ec5ff973cddaf4ff6b96
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/8fa359f598c6ca3c73c7ec5ff973cddaf4ff6b96
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-10-17 (Fri, 17 Oct 2014)

  Changed paths:
    M meta/WriteOut.m

  Log Message:
  -----------
  diagonalize the Yukawa couplings, as required by SLHA-2


  Commit: d04372ac55b8e88f503a5b35ecc38e157b010a04
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/d04372ac55b8e88f503a5b35ecc38e157b010a04
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-10-17 (Fri, 17 Oct 2014)

  Changed paths:
    M test/module.mk
    M test/test_MSSM_low_scale_constraint.cpp
    A test/test_MSSM_low_scale_constraint_flavour.cpp

  Log Message:
  -----------
  put MSSM fermion flavour mixing test into separate file


  Commit: 47ce8a234d1011ef1178f670a030959a28864caa
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/47ce8a234d1011ef1178f670a030959a28864caa
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-10-18 (Sat, 18 Oct 2014)

  Changed paths:
    M templates/two_scale_low_scale_constraint.cpp.in

  Log Message:
  -----------
  remove right CKM matrix factor, as it is irrelevant


  Commit: 3ea0bc199a0f961e7520753b1af55c6aa973b941
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/3ea0bc199a0f961e7520753b1af55c6aa973b941
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-10-18 (Sat, 18 Oct 2014)

  Changed paths:
    M templates/two_scale_low_scale_constraint.cpp.in

  Log Message:
  -----------
  Revert "remove right CKM matrix factor, as it is irrelevant"

This reverts commit 47ce8a234d1011ef1178f670a030959a28864caa.

The low-energy Yukawa couplings with commit
47ce8a234d1011ef1178f670a030959a28864caa do not match Softsusy.
I need to check this.


  Commit: 109a011c8b7b3cbd524774851217b6ff705cfdab
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/109a011c8b7b3cbd524774851217b6ff705cfdab
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-10-20 (Mon, 20 Oct 2014)

  Changed paths:
    M templates/slha_io.hpp.in

  Log Message:
  -----------
  Correcting definition of CKM matrix in terms of Vd and Vu

In FlexibleSUSY the SVD of the SM Fermion mass matrix `mass_matrix_Fd'
(= YD^T) is defined as:

  fs_svd(mass_matrix_Fd, MFd, ZDL, ZDR);

where

  mass_matrix_Fd == ZDL.transpose() * MFd.matrix().asDiagonal() * ZDR

i.e.

  MFd.matrix() == ZDL.conj() * mass_matrix_Fd * ZDR.adjoint()

In Softsusy and SLHA-2 the fermion masses are defined as:

  displayYukawaMatrix(YD).diagonalise(Vd, Ud, yd);

where

  yd = Vd^T * YD * Ud

     = Ud^T * YD^T * Vd   (Eq. (8) in SLHA-2)

This means, that we have the correspondance

  ZDL.conj()     ==  Vd^T
  ZDR.adjoint()  ==  Ud

Note, that SARAH's/FlexibleSUSY's Yukawa couplings are defined to be
transposed compared to SLHA-2.
On 18.10.2014 17:28, jhyeon wrote:
> Hi Alex, if I look at the generated MSSM code, `V_u` and `V_d` are
> initialized to `ZUL` and `ZDL`, respectively, which I think are the
> hermitian conjugates of V_u and V_d appearing in Eq. (8) of SLHA2.


  Commit: a4ce511e90eee6117b0a65c0d636c940d82940d9
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/a4ce511e90eee6117b0a65c0d636c940d82940d9
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-10-20 (Mon, 20 Oct 2014)

  Changed paths:
    M templates/two_scale_low_scale_constraint.cpp.in
    M test/test_MSSM_low_scale_constraint_flavour.cpp

  Log Message:
  -----------
  omit rhs CKM matrix factor

On 18.10.2014 19:22, jhyeon wrote:
> in the SM, right-handed quark rotation is unphysical.  In a
> supersymmetric model, right-handed quark rotation changes the
> misalignment between the quark and the squark mass eigenstates.
> This obviously has a physical effect if squark masses are
> non-universal at the scale where quark masses are diagonalized.  I
> was not sure whether right-handed quark rotation is physical or not
> with the CMSSM boundary condition which enforces universal squark
> masses but at a scale higher than the scale where the CKM matrix is
> evaluated.  What you said suggests that the right-handed quark
> rotation has a physical consequence.  In any case, we allow for a
> non-universal boundary condition via the model file.  Therefore, we
> should not hard-wire the low-energy Yukawa matrices since this would
> forbid the other potentially viable Yukawa matrices which are
> physically distinct from the current choice while correctly
> reproducing the CKM matrix.  Any pair of `Yu = Uu*Yu_diag*CKM*V` and
> `Yd = Ud*Yd_diag*V` for some unitary matrices `Uu`, `Ud`, `V` should
> be available to the user.  What do you think?  BTW, how do you
> compare the Yukawa couplings?  Is there a component of the test
> suite for this?


  Commit: 299ae77cacd4c57df12b5a5854f104f4e768fb03
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/299ae77cacd4c57df12b5a5854f104f4e768fb03
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-10-20 (Mon, 20 Oct 2014)

  Changed paths:
    M test/test_MSSM_low_scale_constraint_flavour.cpp

  Log Message:
  -----------
  relaxing test precision after checking the results in detail

As described in the comment, the deviation stems from the different
VEV used to calculate the Yukawa couplings.


  Commit: ad80d490f94fdbd5f5864cd747b44ad235433b8d
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/ad80d490f94fdbd5f5864cd747b44ad235433b8d
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-10-20 (Mon, 20 Oct 2014)

  Changed paths:
    M src/ckm.cpp

  Log Message:
  -----------
  set phase factor to sign of complex phase in real CKM matrix

In the PDG parametrization all s_ij and c_ij are greater than zero.
Setting the phase factor to the sign of s_13 does therefore not make
much sense.


  Commit: a51a0fef5faf3af553ae93992b7edf7cd48d2172
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/a51a0fef5faf3af553ae93992b7edf7cd48d2172
  Author: Alexander Voigt <alexander.voigt at desy.de>
  Date:   2014-10-21 (Tue, 21 Oct 2014)

  Changed paths:
    M test/module.mk
    A test/test_ckm.cpp

  Log Message:
  -----------
  add test for CKM matrix module


  Commit: 1e7ec98e05fc5119c43af4109a9aaa23aba0b79e
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/1e7ec98e05fc5119c43af4109a9aaa23aba0b79e
  Author: Alexander Voigt <alexander.voigt at desy.de>
  Date:   2014-10-21 (Tue, 21 Oct 2014)

  Changed paths:
    M test/test.h

  Log Message:
  -----------
  simplify matrix comparison and add complex is_equal() function


  Commit: 79e4e397007e06687bbadf21167d6aeae787fa79
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/79e4e397007e06687bbadf21167d6aeae787fa79
  Author: Alexander Voigt <alexander.voigt at desy.de>
  Date:   2014-10-21 (Tue, 21 Oct 2014)

  Changed paths:
    M test/test_ckm.cpp

  Log Message:
  -----------
  add test for unitarity of CKM matrix


  Commit: f29f9457e8d2a82bd8bbdb168b14ccf72568a2d3
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/f29f9457e8d2a82bd8bbdb168b14ccf72568a2d3
  Author: Alexander Voigt <alexander.voigt at desy.de>
  Date:   2014-10-21 (Tue, 21 Oct 2014)

  Changed paths:
    M src/ckm.cpp
    M src/ckm.hpp
    M test/test_ckm.cpp

  Log Message:
  -----------
  add CKM matrix conversion function to PDG convention


  Commit: 86d6fe01f930255716e06a48bb61bb8f60966460
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/86d6fe01f930255716e06a48bb61bb8f60966460
  Author: Alexander Voigt <alexander.voigt at desy.de>
  Date:   2014-10-21 (Tue, 21 Oct 2014)

  Changed paths:
    M src/ckm.cpp

  Log Message:
  -----------
  simplify calculation of phase matrices


  Commit: 747859eb97e9c3dc13847c10dc7fa59a95885c83
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/747859eb97e9c3dc13847c10dc7fa59a95885c83
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-10-26 (Sun, 26 Oct 2014)

  Changed paths:
    M meta/WriteOut.m

  Log Message:
  -----------
  rotate soft parameters for SLHA-2 compatible output

Pleaes note, that FS's Yukawa couplings are the transposed of the ones
defined in SLHA-2.  This leads to the property that FS's fermion
mixing matrices are the adjoint of the ones given in SLHA-2.


  Commit: e0a5cf07f9c581e41dc5cf3a07609f65c73b3006
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/e0a5cf07f9c581e41dc5cf3a07609f65c73b3006
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-11-01 (Sat, 01 Nov 2014)

  Changed paths:
    M meta/WriteOut.m

  Log Message:
  -----------
  correcting SLHA-2 output convention for soft trilinear couplings

Since the MSSM superpotential in SARAH has the form

    W =  Yu u.q.Hu - Yd d.q.Hd - Ye e.l.Hd + ...

our Yukawa couplings (and thus the trilinear couplings) are
transposed, compared to SLHA-2.  I.e. the output as written in
Eq. (14) should read in our convention:

    u.conjugate() * MODELPARAMETER(TYe) * v.adjoint()
    u.conjugate() * MODELPARAMETER(TYd) * v.adjoint()
    u.conjugate() * MODELPARAMETER(TYu) * v.adjoint()


  Commit: cb2f209f24d1c934aa6d36dba4f93ee7b322b8b7
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/cb2f209f24d1c934aa6d36dba4f93ee7b322b8b7
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-11-01 (Sat, 01 Nov 2014)

  Changed paths:
    M templates/slha_io.cpp.in
    M templates/slha_io.hpp.in

  Log Message:
  -----------
  pass only information to set_ckm which is really needed


  Commit: 15159cab43cc9587b1b5792ba14e5866c685f9b4
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/15159cab43cc9587b1b5792ba14e5866c685f9b4
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-11-01 (Sat, 01 Nov 2014)

  Changed paths:
    M src/ckm.cpp
    M src/ckm.hpp

  Log Message:
  -----------
  add PDG conversion functions for fermion mixing matrices

Note: These conversion functions currently only convert the real part
of the mixing matrices.


  Commit: f6f8aaaf5057b33ea0edd06d53aeb9ff3a0ee0b0
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/f6f8aaaf5057b33ea0edd06d53aeb9ff3a0ee0b0
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-11-01 (Sat, 01 Nov 2014)

  Changed paths:
    M meta/WriteOut.m

  Log Message:
  -----------
  convert fermion pole mass mixing matrices to PDG convention

such that the CKM matrix is in the PDG convention.


  Commit: 83fdb61644f616635f077a6e3d296d575a3bc92c
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/83fdb61644f616635f077a6e3d296d575a3bc92c
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-11-02 (Sun, 02 Nov 2014)

  Changed paths:
    M templates/slha_io.hpp.in

  Log Message:
  -----------
  convert DR-bar fermion mixing matrices to PDG convention


  Commit: d7b9b692e84e9331c44c546341efe15751d3fdc2
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/d7b9b692e84e9331c44c546341efe15751d3fdc2
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-11-02 (Sun, 02 Nov 2014)

  Changed paths:
    M src/ew_input.hpp
    M src/module.mk
    A src/pmns.cpp
    A src/pmns.hpp

  Log Message:
  -----------
  add module for PMNS matrix


  Commit: 36ccef15f7db911279f1896812e2acdc962ec157
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/36ccef15f7db911279f1896812e2acdc962ec157
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-11-02 (Sun, 02 Nov 2014)

  Changed paths:
    M model_files/MSSM/LesHouches.in.MSSM
    M src/lowe.h
    M src/slha_io.cpp
    M src/slha_io.hpp

  Log Message:
  -----------
  read PMNS matrix from SLHA input file


  Commit: 957a3a0743674ac634ff7475a42c1e7964765270
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/957a3a0743674ac634ff7475a42c1e7964765270
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-11-02 (Sun, 02 Nov 2014)

  Changed paths:
    M model_files/MSSM/LesHouches.in.MSSM

  Log Message:
  -----------
  use current PDG values for PMNS matrix angles


  Commit: 61c01c0444866fe5e2a795ca040fac67c94ea083
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/61c01c0444866fe5e2a795ca040fac67c94ea083
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-11-02 (Sun, 02 Nov 2014)

  Changed paths:
    M src/pmns.cpp
    M src/pmns.hpp

  Log Message:
  -----------
  rename PMNS matrix getter function


  Commit: 38157d176ea849a6acaceb7eacf97263436d9e77
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/38157d176ea849a6acaceb7eacf97263436d9e77
  Author: Alexander Voigt <Alexander.Voigt at desy.de>
  Date:   2014-12-05 (Fri, 05 Dec 2014)

  Changed paths:
    M .gitattributes
    M .gitignore
    M ChangeLog
    M config/Makefile.customized-betas.in
    M config/Makefile.in
    M config/config.h.in
    M config/convert_dos_paths.sh
    M config/install_stripped.sh
    M configure
    M createmodel
    R doc/flexiblesusy-paper-response-1.tex
    M doc/flexiblesusy-paper.tex
    M examples/customized-betas/LesHouches.in.MSSMcbs
    M examples/customized-betas/MSSMcbs_spectrum_generator.hpp
    M examples/customized-betas/MSSMcbs_two_scale_initial_guesser.cpp
    M examples/customized-betas/MSSMcbs_two_scale_initial_guesser.hpp
    M examples/customized-betas/MSSMcbs_two_scale_low_scale_constraint.cpp
    M examples/customized-betas/MSSMcbs_two_scale_low_scale_constraint.hpp
    M examples/customized-betas/MSSMcbs_two_scale_model.cpp
    M examples/customized-betas/MSSMcbs_two_scale_model.hpp
    M examples/customized-betas/custombetas.cpp
    M examples/switch_MSSM.cpp
    M examples/tower/LesHouches.in.tower
    M examples/tower/MSSMD5O_MSSMRHN_spectrum_generator.hpp
    M examples/tower/MSSMD5O_MSSMRHN_two_scale_matching.cpp
    M examples/tower/MSSMD5O_MSSMRHN_two_scale_matching.hpp
    M examples/tower/run_tower.cpp
    M install-sarah
    M meta/CConversion.m
    M meta/Constraint.m
    M meta/EWSB.m
    M meta/FlexibleSUSY.m
    M meta/LoopMasses.m
    M meta/Parameters.m
    M meta/SelfEnergies.m
    M meta/ThresholdCorrections.m
    M meta/TreeMasses.m
    M meta/WriteOut.m
    A model_files/CMSSM/FlexibleSUSY.m.in
    A model_files/CMSSM/LesHouches.in.CMSSM
    A model_files/CMSSMNoFV/FlexibleSUSY.m.in
    A model_files/CMSSMNoFV/LesHouches.in.CMSSMNoFV
    M model_files/E6SSM/FlexibleSUSY.m.in
    M model_files/E6SSM/LesHouches.in.E6SSM
    R model_files/FlexibleSUSY.m.in
    M model_files/InertMSSM/FlexibleSUSY.m.in
    M model_files/LHInputMSSM/FlexibleSUSY.m.in
    A model_files/LHInputMSSM/LesHouches.in.LHInputMSSM
    M model_files/MRSSM/LesHouches.in.MRSSM
    M model_files/MSSM/FlexibleSUSY.m.in
    M model_files/MSSM/LesHouches.in.MSSM
    M model_files/MSSMCPV/FlexibleSUSY.m.in
    M model_files/MSSMD5O/FlexibleSUSY.m.in
    M model_files/MSSMNoFV/FlexibleSUSY.m.in
    A model_files/MSSMNoFV/LesHouches.in.MSSMNoFV
    A model_files/MSSMNoFVatMGUT/FlexibleSUSY.m.in
    A model_files/MSSMNoFVatMGUT/LesHouches.in.MSSMNoFVatMGUT
    M model_files/MSSMRHN/FlexibleSUSY.m.in
    A model_files/MSSMatMGUT/FlexibleSUSY.m.in
    A model_files/MSSMatMGUT/LesHouches.in.MSSMatMGUT
    M model_files/NMSSM/FlexibleSUSY.m.in
    M model_files/NMSSM/LesHouches.in.NMSSM
    A model_files/NSM/FlexibleSUSY.m.in
    A model_files/NSM/LesHouches.in.NSM
    M model_files/NUHMSSM/FlexibleSUSY.m.in
    M model_files/NUHMSSM/LesHouches.in.NUHMSSM
    M model_files/NoYukawaMSSM/FlexibleSUSY.m.in
    M model_files/SM/FlexibleSUSY.m.in
    M model_files/SMSSM/FlexibleSUSY.m.in
    M model_files/TMSSM/FlexibleSUSY.m.in
    M model_files/UMSSM/FlexibleSUSY.m.in
    M model_files/UMSSM/LesHouches.in.UMSSM
    M model_files/YukawaCMSSM/FlexibleSUSY.m.in
    M model_files/lowMSSM/FlexibleSUSY.m.in
    M model_files/lowMSSM/LesHouches.in.lowMSSM
    M model_files/minMSSM/FlexibleSUSY.m.in
    A model_files/munuSSM/FlexibleSUSY.m.in
    A model_files/munuSSM/LesHouches.in.munuSSM
    M model_files/rootMSSM/FlexibleSUSY.m.in
    M models/SoftsusyMSSM/SoftsusyMSSM_two_scale_low_scale_constraint.cpp
    M models/SoftsusyMSSM/SoftsusyMSSM_two_scale_sugra_constraint.cpp
    M models/SoftsusyMSSM/SoftsusyMSSM_two_scale_susy_scale_constraint.cpp
    M models/SoftsusyMSSM/softsusy.h
    M models/SoftsusyNMSSM/SoftsusyNMSSM_two_scale_low_scale_constraint.cpp
    M models/SoftsusyNMSSM/SoftsusyNMSSM_two_scale_sugra_constraint.cpp
    M models/SoftsusyNMSSM/SoftsusyNMSSM_two_scale_susy_scale_constraint.cpp
    M models/sm/sm_two_scale_experimental_constraint.cpp
    M models/smcw/smcw_two_scale_gut_constraint.cpp
    A sarah/NSM/NSM.m
    A sarah/NSM/parameters.m
    A sarah/NSM/particles.m
    M src/build_info.cpp
    M src/error.hpp
    A src/higgs_2loop_corrections.hpp
    M src/linalg2.hpp
    M src/module.mk
    M src/mssm_twoloophiggs.h
    M src/nmssm2loop.h
    M src/problems.hpp
    M src/slha_io.cpp
    M src/slha_io.hpp
    M src/spectrum_generator_settings.cpp
    M src/spectrum_generator_settings.hpp
    M src/two_scale_constraint.hpp
    M templates/info.cpp.in
    M templates/info.hpp.in
    A templates/input_parameters.cpp.in
    M templates/input_parameters.hpp.in
    M templates/low_scale_spectrum_generator.hpp.in
    A templates/model_slha.hpp.in
    M templates/module.mk
    M templates/module.mk.in
    M templates/physical.cpp.in
    M templates/run.cpp.in
    A templates/run_cmd_line.cpp.in
    M templates/scan.cpp.in
    M templates/slha_io.cpp.in
    M templates/slha_io.hpp.in
    M templates/spectrum_generator.hpp.in
    M templates/two_scale_high_scale_constraint.cpp.in
    M templates/two_scale_high_scale_constraint.hpp.in
    M templates/two_scale_low_scale_constraint.cpp.in
    M templates/two_scale_low_scale_constraint.hpp.in
    M templates/two_scale_model.cpp.in
    M templates/two_scale_model.hpp.in
    A templates/two_scale_model_slha.cpp.in
    A templates/two_scale_model_slha.hpp.in
    M templates/two_scale_susy_scale_constraint.cpp.in
    M templates/two_scale_susy_scale_constraint.hpp.in
    M test/module.mk
    A test/test_CMSSM.hpp
    A test/test_CMSSMNoFV.hpp
    A test/test_CMSSMNoFV_beta_functions.cpp
    A test/test_CMSSMNoFV_low_scale_constraint.cpp
    A test/test_CMSSMNoFV_tree_level_spectrum.cpp
    A test/test_CMSSM_NMSSM_linking.cpp
    A test/test_CMSSM_higgs_iteration.cpp
    A test/test_CMSSM_high_scale_constraint.cpp
    A test/test_CMSSM_info.cpp
    A test/test_CMSSM_initial_guesser.cpp
    A test/test_CMSSM_low_scale_constraint.cpp
    A test/test_CMSSM_model.cpp
    A test/test_CMSSM_slha.cpp
    A test/test_CMSSM_slha_doubled_blocks.sh
    A test/test_CMSSM_slha_input.cpp
    A test/test_CMSSM_slha_output.cpp
    A test/test_CMSSM_slha_output.in.spc
    A test/test_CMSSM_spectrum.cpp
    A test/test_CMSSM_susy_scale_constraint.cpp
    R test/test_MSSM.hpp
    R test/test_MSSMNoFV.hpp
    R test/test_MSSMNoFV_beta_functions.cpp
    R test/test_MSSMNoFV_low_scale_constraint.cpp
    R test/test_MSSMNoFV_tree_level_spectrum.cpp
    R test/test_MSSM_NMSSM_linking.cpp
    R test/test_MSSM_higgs_iteration.cpp
    R test/test_MSSM_high_scale_constraint.cpp
    R test/test_MSSM_info.cpp
    R test/test_MSSM_initial_guesser.cpp
    R test/test_MSSM_low_scale_constraint.cpp
    R test/test_MSSM_model.cpp
    R test/test_MSSM_slha_input.cpp
    R test/test_MSSM_slha_output.cpp
    R test/test_MSSM_slha_output.in.spc
    R test/test_MSSM_spectrum.cpp
    R test/test_MSSM_susy_scale_constraint.cpp
    M test/test_NMSSM_high_scale_constraint.cpp
    M test/test_NMSSM_initial_guesser.cpp
    M test/test_NMSSM_low_scale_constraint.cpp
    M test/test_NMSSM_one_loop_spectrum.cpp
    M test/test_NMSSM_spectrum.cpp
    M test/test_NMSSM_susy_scale_constraint.cpp
    A test/test_NSM_low_scale_constraint.cpp
    M test/test_SMSSM_ewsb.cpp
    M test/test_SMSSM_one_loop_spectrum.cpp
    A test/test_SM_beta_functions.cpp
    A test/test_SM_low_scale_constraint.cpp
    A test/test_cast_model.cpp
    M test/test_linalg2.cpp
    M test/test_loopfunctions.cpp
    M test/test_lowMSSM.sh
    M test/test_run_examples.sh
    M test/test_sfermions.cpp
    M test/test_slha_io.cpp
    M test/test_two_scale_sm_smcw_integration.cpp
    M test/test_two_scale_solver.cpp

  Log Message:
  -----------
  Merge branch 'development' into feature-ckm

Conflicts:
	templates/slha_io.hpp.in
	test/module.mk


  Commit: 5000ffaafcc6b837969961a768dfbdb253ae7708
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/5000ffaafcc6b837969961a768dfbdb253ae7708
  Author: Alexander Voigt <Alexander.Voigt at desy.de>
  Date:   2014-12-05 (Fri, 05 Dec 2014)

  Changed paths:
    M test/module.mk
    A test/test_CMSSM_low_scale_constraint_flavour.cpp
    R test/test_MSSM_low_scale_constraint_flavour.cpp

  Log Message:
  -----------
  rename MSSM --> CMSSM


  Commit: 4b361b3528e2e8c6bfe2c3a31cdeb9fee57c3f22
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/4b361b3528e2e8c6bfe2c3a31cdeb9fee57c3f22
  Author: Alexander Voigt <Alexander.Voigt at desy.de>
  Date:   2014-12-05 (Fri, 05 Dec 2014)

  Changed paths:
    M templates/slha_io.hpp.in

  Log Message:
  -----------
  accept CKM matrix in SLHA conversion


  Commit: 3ff68c92924344fbcd8a6ab7b7e50a34138172da
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/3ff68c92924344fbcd8a6ab7b7e50a34138172da
  Author: Alexander Voigt <Alexander.Voigt at desy.de>
  Date:   2014-12-06 (Sat, 06 Dec 2014)

  Changed paths:
    M test/test_ckm.cpp

  Log Message:
  -----------
  add comment to explain transpose of CKM matrix


  Commit: ddbdcdb1cb5a2018e12cc9401c66e439af57a4c0
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/ddbdcdb1cb5a2018e12cc9401c66e439af57a4c0
  Author: Alexander Voigt <Alexander.Voigt at desy.de>
  Date:   2014-12-07 (Sun, 07 Dec 2014)

  Changed paths:
    M templates/two_scale_model_slha.hpp.in

  Log Message:
  -----------
  Merge branch 'development' into feature-ckm


  Commit: b118aa7068d190a73e8de75d7eb42387dcc544f5
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/b118aa7068d190a73e8de75d7eb42387dcc544f5
  Author: Alexander Voigt <Alexander.Voigt at desy.de>
  Date:   2014-12-07 (Sun, 07 Dec 2014)

  Changed paths:
    M meta/CConversion.m
    M meta/FlexibleSUSY.m
    M meta/WriteOut.m
    M templates/two_scale_model_slha.cpp.in
    M templates/two_scale_model_slha.hpp.in
    M test/test_CMSSM_slha.cpp

  Log Message:
  -----------
  convert Yukawa couplings to SLHA convention in SLHA model class wrapper


  Commit: b2f62e1bf03fb9512e3a75aea61f8e52090a6dea
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/b2f62e1bf03fb9512e3a75aea61f8e52090a6dea
  Author: Alexander Voigt <Alexander.Voigt at desy.de>
  Date:   2014-12-07 (Sun, 07 Dec 2014)

  Changed paths:
    M meta/FlexibleSUSY.m
    M meta/WriteOut.m
    M templates/two_scale_model_slha.hpp.in

  Log Message:
  -----------
  store fermion mixing matrices in the class

to avoid frequent diagonalization.


  Commit: 8cb60c064b9b90728ae51a7859dd9784225700f5
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/8cb60c064b9b90728ae51a7859dd9784225700f5
  Author: Alexander Voigt <Alexander.Voigt at desy.de>
  Date:   2014-12-07 (Sun, 07 Dec 2014)

  Changed paths:
    M meta/FlexibleSUSY.m
    M meta/WriteOut.m
    M templates/two_scale_model_slha.cpp.in
    M templates/two_scale_model_slha.hpp.in

  Log Message:
  -----------
  converting trilinear couplings


  Commit: fadd04b3ac109cb995bf002aba5170e94411ca35
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/fadd04b3ac109cb995bf002aba5170e94411ca35
  Author: Alexander Voigt <Alexander.Voigt at desy.de>
  Date:   2014-12-07 (Sun, 07 Dec 2014)

  Changed paths:
    M test/test_CMSSM_slha.cpp

  Log Message:
  -----------
  test SLHA conversion of triliear couplings


  Commit: 7eee50322e6b682b8b4af6f44e563b50d24cf602
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/7eee50322e6b682b8b4af6f44e563b50d24cf602
  Author: Alexander Voigt <Alexander.Voigt at desy.de>
  Date:   2014-12-07 (Sun, 07 Dec 2014)

  Changed paths:
    M meta/FlexibleSUSY.m
    M meta/WriteOut.m
    M templates/two_scale_model_slha.cpp.in
    M templates/two_scale_model_slha.hpp.in

  Log Message:
  -----------
  convert soft squared masses to SLHA


  Commit: 2f929dd5d41dc1c74c9c10645979d02ada22b37b
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/2f929dd5d41dc1c74c9c10645979d02ada22b37b
  Author: Alexander Voigt <Alexander.Voigt at desy.de>
  Date:   2014-12-07 (Sun, 07 Dec 2014)

  Changed paths:
    M test/test_CMSSM_slha.cpp

  Log Message:
  -----------
  test SLHA conversion for soft sqared masses


  Commit: 399a21b07ea88a5f64e3392b568a1e0a25eed7d3
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/399a21b07ea88a5f64e3392b568a1e0a25eed7d3
  Author: Alexander Voigt <Alexander.Voigt at desy.de>
  Date:   2014-12-07 (Sun, 07 Dec 2014)

  Changed paths:
    M meta/WriteOut.m
    M src/wrappers.hpp

  Log Message:
  -----------
  remove SLHA conversion from io class

use converted couplings from SLHA model class wrapper instead


  Commit: 2f75264560ee5b7b7e48e6549142eb39adffa1fe
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/2f75264560ee5b7b7e48e6549142eb39adffa1fe
  Author: Alexander Voigt <Alexander.Voigt at desy.de>
  Date:   2014-12-07 (Sun, 07 Dec 2014)

  Changed paths:
    M meta/FlexibleSUSY.m
    M meta/WriteOut.m
    M templates/slha_io.cpp.in
    M templates/slha_io.hpp.in
    M templates/two_scale_model_slha.cpp.in
    M templates/two_scale_model_slha.hpp.in

  Log Message:
  -----------
  move SLHA mixing matrix conversion to SLHA model wrapper class

This decouples slha_io and model_slha


  Commit: 0828d6e7752abb56fd8c9aef58ec6dae8e2b678e
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/0828d6e7752abb56fd8c9aef58ec6dae8e2b678e
  Author: Alexander Voigt <Alexander.Voigt at desy.de>
  Date:   2014-12-07 (Sun, 07 Dec 2014)

  Changed paths:
    M meta/FlexibleSUSY.m
    M meta/WriteOut.m
    M templates/slha_io.cpp.in
    M templates/slha_io.hpp.in
    M templates/two_scale_model_slha.cpp.in
    M templates/two_scale_model_slha.hpp.in
    M test/test_CMSSM_slha.cpp
    M test/test_ckm.cpp

  Log Message:
  -----------
  use calculated CKM matrix from SLHA wrapper class


  Commit: 34404447972b2361941d32f32c838574ae8b9265
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/34404447972b2361941d32f32c838574ae8b9265
  Author: Alexander Voigt <Alexander.Voigt at desy.de>
  Date:   2014-12-07 (Sun, 07 Dec 2014)

  Changed paths:
    M test/test_ckm.cpp

  Log Message:
  -----------
  remove wrong test


  Commit: 6f0b1730b7d0dde6795c762f0fbdce23132eab8f
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/6f0b1730b7d0dde6795c762f0fbdce23132eab8f
  Author: Alexander Voigt <Alexander.Voigt at desy.de>
  Date:   2014-12-07 (Sun, 07 Dec 2014)

  Changed paths:
    M test/test_ckm.cpp

  Log Message:
  -----------
  Revert "remove wrong test"

This reverts commit 34404447972b2361941d32f32c838574ae8b9265.


  Commit: cab97e71deeb247b8d5e2008b471f104f4168655
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/cab97e71deeb247b8d5e2008b471f104f4168655
  Author: Alexander Voigt <Alexander.Voigt at desy.de>
  Date:   2014-12-07 (Sun, 07 Dec 2014)

  Changed paths:
    M test/test_ckm.cpp

  Log Message:
  -----------
  restore corrected version of the deleted test case


  Commit: d18a243ce6d05f5fdc30d8e8724cc639634693fd
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/d18a243ce6d05f5fdc30d8e8724cc639634693fd
  Author: Alexander Voigt <Alexander.Voigt at desy.de>
  Date:   2014-12-08 (Mon, 08 Dec 2014)

  Changed paths:
    M src/ckm.cpp

  Log Message:
  -----------
  Bugfix: overwrite signs in complex CKM matrix as well


  Commit: f4e60ec4474fbb49c8737cb1f3ab1635c96ec466
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/f4e60ec4474fbb49c8737cb1f3ab1635c96ec466
  Author: Alexander Voigt <Alexander.Voigt at desy.de>
  Date:   2014-12-08 (Mon, 08 Dec 2014)

  Changed paths:
    M test/test_CMSSM_slha_input.cpp

  Log Message:
  -----------
  avoid comparison of tiny numbers


  Commit: 2c31265abb813265f30bb26bb47a390219b0f62a
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/2c31265abb813265f30bb26bb47a390219b0f62a
  Author: Alexander Voigt <alexander.voigt at desy.de>
  Date:   2014-12-09 (Tue, 09 Dec 2014)

  Changed paths:
    M src/wrappers.hpp

  Log Message:
  -----------
  adding Re() helper functions for Eigen matrices


  Commit: 1891e352df483aa006dc7700db66f964bb15ea10
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/1891e352df483aa006dc7700db66f964bb15ea10
  Author: Alexander Voigt <alexander.voigt at desy.de>
  Date:   2014-12-09 (Tue, 09 Dec 2014)

  Changed paths:
    A model_files/MSSMCKM/FlexibleSUSY.m.in
    A model_files/MSSMCKM/LesHouches.in.MSSMCKM

  Log Message:
  -----------
  adding MSSM variant with flavour mixing GUT constraint


  Commit: 6e189d53db5416bda37b580f937620262785b7cc
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/6e189d53db5416bda37b580f937620262785b7cc
  Author: Alexander Voigt <alexander.voigt at desy.de>
  Date:   2014-12-09 (Tue, 09 Dec 2014)

  Changed paths:
    M src/wrappers.hpp

  Log Message:
  -----------
  make Re() accept expressions


  Commit: 3eaf96f3e1d032d5f280c2e09bafca718d9fc43c
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/3eaf96f3e1d032d5f280c2e09bafca718d9fc43c
  Author: Alexander Voigt <Alexander.Voigt at desy.de>
  Date:   2014-12-09 (Tue, 09 Dec 2014)

  Changed paths:
    M templates/two_scale_low_scale_constraint.cpp.in
    M templates/two_scale_low_scale_constraint.hpp.in

  Log Message:
  -----------
  make CKM matrix symbol available


  Commit: a61ea72d7cea6f53366e21776fb310e81fe09387
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/a61ea72d7cea6f53366e21776fb310e81fe09387
  Author: Alexander Voigt <Alexander.Voigt at desy.de>
  Date:   2014-12-09 (Tue, 09 Dec 2014)

  Changed paths:
    M model_files/MSSMCKM/FlexibleSUSY.m.in

  Log Message:
  -----------
  determine Yukawa couplings taking CKM matrix into account

and wrap MatMul around matrix products to avoid blind commutation


  Commit: a1abc55ff272773f7be99eff0ebb291351dc2d57
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/a1abc55ff272773f7be99eff0ebb291351dc2d57
  Author: Alexander Voigt <Alexander.Voigt at desy.de>
  Date:   2014-12-10 (Wed, 10 Dec 2014)

  Changed paths:
    M src/lowe.cpp
    M src/lowe.h

  Log Message:
  -----------
  add neutrino masses to low-energy data class


  Commit: 8dc5e75b9df83d04f05be76ab6d2cb7411167746
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/8dc5e75b9df83d04f05be76ab6d2cb7411167746
  Author: Alexander Voigt <Alexander.Voigt at desy.de>
  Date:   2014-12-10 (Wed, 10 Dec 2014)

  Changed paths:
    M src/slha_io.cpp

  Log Message:
  -----------
  set neutrino masses from SMINPUTS


  Commit: edafd3995c9384c86492933299d686882691fe2b
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/edafd3995c9384c86492933299d686882691fe2b
  Author: Alexander Voigt <Alexander.Voigt at desy.de>
  Date:   2014-12-10 (Wed, 10 Dec 2014)

  Changed paths:
    M src/slha_io.cpp

  Log Message:
  -----------
  write stored neutrino masses to SMINPUTS output


  Commit: 308c988fb5cab3f48b90f966dcd5a9804fe97fc2
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/308c988fb5cab3f48b90f966dcd5a9804fe97fc2
  Author: Alexander Voigt <Alexander.Voigt at desy.de>
  Date:   2014-12-10 (Wed, 10 Dec 2014)

  Changed paths:
    M templates/two_scale_low_scale_constraint.cpp.in
    M templates/two_scale_low_scale_constraint.hpp.in

  Log Message:
  -----------
  add support for PMNS symbol in low-energy constraint


  Commit: bdb054e20baa0a5acbad6aff866803c3c2c448fa
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/bdb054e20baa0a5acbad6aff866803c3c2c448fa
  Author: Alexander Voigt <Alexander.Voigt at desy.de>
  Date:   2014-12-10 (Wed, 10 Dec 2014)

  Changed paths:
    M meta/Constraint.m
    M meta/FlexibleSUSY.m
    M meta/WriteOut.m
    M templates/slha_io.cpp.in
    M templates/slha_io.hpp.in
    M templates/two_scale_model_slha.cpp.in
    M templates/two_scale_model_slha.hpp.in

  Log Message:
  -----------
  add PMNS matrix to SLHA wrapper class and write it to SLHA output file


  Commit: 4b228f017c3346ca22d6c84d8bdc4f7164c6c304
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/4b228f017c3346ca22d6c84d8bdc4f7164c6c304
  Author: Alexander Voigt <Alexander.Voigt at desy.de>
  Date:   2014-12-10 (Wed, 10 Dec 2014)

  Changed paths:
    M model_files/MSSM/LesHouches.in.MSSM
    M model_files/MSSMCKM/LesHouches.in.MSSMCKM

  Log Message:
  -----------
  fixing typos in UPMNSIN block


  Commit: e57e7f2e5423c298ac02eede8630a9ed5861c24e
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/e57e7f2e5423c298ac02eede8630a9ed5861c24e
  Author: Alexander Voigt <Alexander.Voigt at desy.de>
  Date:   2014-12-15 (Mon, 15 Dec 2014)

  Changed paths:
    M test/test_ckm.cpp

  Log Message:
  -----------
  remove unused header file


  Commit: 3ea4ca65bbbe7a3a68e51450b7b8f8b49df9389c
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/3ea4ca65bbbe7a3a68e51450b7b8f8b49df9389c
  Author: Alexander Voigt <Alexander.Voigt at desy.de>
  Date:   2014-12-15 (Mon, 15 Dec 2014)

  Changed paths:
    A model_files/CMSSMCKM/FlexibleSUSY.m.in
    A model_files/CMSSMCKM/LesHouches.in.CMSSMCKM
    R model_files/MSSMCKM/FlexibleSUSY.m.in
    R model_files/MSSMCKM/LesHouches.in.MSSMCKM

  Log Message:
  -----------
  convert MSSMCKM model into CMSSMCKM model

for comparison with Softsusy and SLHA-2.


  Commit: 11bd3c3ac8a2acb4b216ddcec9ad739cc08545e6
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/11bd3c3ac8a2acb4b216ddcec9ad739cc08545e6
  Author: Alexander Voigt <Alexander.Voigt at desy.de>
  Date:   2014-12-15 (Mon, 15 Dec 2014)

  Changed paths:
    M test/test.h

  Log Message:
  -----------
  Bugfix: correcting test for equality of two numbers


  Commit: 3182a4a4a9d6ec29deb84d1e5632bf9fa4d5e644
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/3182a4a4a9d6ec29deb84d1e5632bf9fa4d5e644
  Author: Alexander Voigt <Alexander.Voigt at desy.de>
  Date:   2014-12-15 (Mon, 15 Dec 2014)

  Changed paths:
    M model_files/CMSSMCKM/FlexibleSUSY.m.in

  Log Message:
  -----------
  correcting high-scale constraint


  Commit: da5b68161cab6d6633afb73e5781fd8b287a961f
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/da5b68161cab6d6633afb73e5781fd8b287a961f
  Author: Alexander Voigt <Alexander.Voigt at desy.de>
  Date:   2014-12-15 (Mon, 15 Dec 2014)

  Changed paths:
    M model_files/CMSSMCKM/FlexibleSUSY.m.in

  Log Message:
  -----------
  adapt to CKM high-scale constraint to our mixing matrix convention


  Commit: 82447553eb56e7f82c8abd69b4035ef3b028bd9e
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/82447553eb56e7f82c8abd69b4035ef3b028bd9e
  Author: Alexander Voigt <Alexander.Voigt at desy.de>
  Date:   2014-12-15 (Mon, 15 Dec 2014)

  Changed paths:
    M model_files/CMSSMCKM/FlexibleSUSY.m.in

  Log Message:
  -----------
  adapt to high-scale constraint to Softsusy convention


  Commit: ecc812fa80fdea983cfc048679afc9ab9bd11869
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/ecc812fa80fdea983cfc048679afc9ab9bd11869
  Author: Alexander Voigt <Alexander.Voigt at desy.de>
  Date:   2014-12-15 (Mon, 15 Dec 2014)

  Changed paths:
    M test/module.mk
    A test/test_CMSSMCKM_high_scale_constraint.cpp

  Log Message:
  -----------
  adding test for CMSSMCKM high-scale constraint


  Commit: 83884d34cc3005efb89ca4f404c1476168e7637b
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/83884d34cc3005efb89ca4f404c1476168e7637b
  Author: Alexander Voigt <Alexander.Voigt at desy.de>
  Date:   2014-12-16 (Tue, 16 Dec 2014)

  Changed paths:
    M test/module.mk
    A test/test_CMSSMCKM_low_scale_constraint.cpp
    R test/test_CMSSM_low_scale_constraint_flavour.cpp

  Log Message:
  -----------
  test low-energy constraint with flavour mixing


  Commit: 8945bbdccea98e1460efa6317224cc1835f6b085
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/8945bbdccea98e1460efa6317224cc1835f6b085
  Author: Alexander Voigt <Alexander.Voigt at desy.de>
  Date:   2014-12-16 (Tue, 16 Dec 2014)

  Changed paths:
    M test/test_CMSSMCKM_low_scale_constraint.cpp

  Log Message:
  -----------
  setup CMSSMCKM model


  Commit: 9496142c076407af7d1d4bcdb7ed17b4dca78b67
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/9496142c076407af7d1d4bcdb7ed17b4dca78b67
  Author: Alexander Voigt <Alexander.Voigt at desy.de>
  Date:   2014-12-16 (Tue, 16 Dec 2014)

  Changed paths:
    M test/test_CMSSMCKM_low_scale_constraint.cpp

  Log Message:
  -----------
  use consistent TanBeta and MZ


  Commit: 46866e67de71eb7dab2c3f0821ee78d1cfeb1bbb
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/46866e67de71eb7dab2c3f0821ee78d1cfeb1bbb
  Author: Alexander Voigt <alexander.voigt at desy.de>
  Date:   2014-12-16 (Tue, 16 Dec 2014)

  Changed paths:
    M test/test_CMSSMCKM_low_scale_constraint.cpp

  Log Message:
  -----------
  use more realistic Yukawa couplings and ensure tree-level EWSB


  Commit: 7c20a847f8a07e6ce56ea3d86bfebcdd618fb052
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/7c20a847f8a07e6ce56ea3d86bfebcdd618fb052
  Author: Alexander Voigt <Alexander.Voigt at desy.de>
  Date:   2014-12-16 (Tue, 16 Dec 2014)

  Changed paths:
    M test/test_CMSSMCKM_low_scale_constraint.cpp

  Log Message:
  -----------
  reset test case to 3rd family approximation and mSUGRA (passes)


  Commit: 6a900c0fb70cc4595d2d696d639acac39080af56
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/6a900c0fb70cc4595d2d696d639acac39080af56
  Author: Alexander Voigt <Alexander.Voigt at desy.de>
  Date:   2014-12-16 (Tue, 16 Dec 2014)

  Changed paths:
    M test/test_CMSSMCKM_low_scale_constraint.cpp

  Log Message:
  -----------
  relax universal scalars constraint


  Commit: 517942f0f447c1cd1a3b80ea79421b0d6875d6c5
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/517942f0f447c1cd1a3b80ea79421b0d6875d6c5
  Author: Alexander Voigt <Alexander.Voigt at desy.de>
  Date:   2014-12-16 (Tue, 16 Dec 2014)

  Changed paths:
    M test/test_CMSSMCKM_low_scale_constraint.cpp

  Log Message:
  -----------
  adding test for DR-bar fermion massses


  Commit: ca4cc2300b93196a6f4e5f8545b0b9e1eadeda59
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/ca4cc2300b93196a6f4e5f8545b0b9e1eadeda59
  Author: Alexander Voigt <Alexander.Voigt at desy.de>
  Date:   2014-12-16 (Tue, 16 Dec 2014)

  Changed paths:
    M model_files/CMSSMCKM/FlexibleSUSY.m.in
    M test/test_CMSSMCKM_low_scale_constraint.cpp

  Log Message:
  -----------
  test non-zero CKM mixing angles and adapt CMSSMCKM model to Softsusy


  Commit: 33ed5f6421971e8a73eff6ab597d19ce9a3a990e
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/33ed5f6421971e8a73eff6ab597d19ce9a3a990e
  Author: Alexander Voigt <Alexander.Voigt at desy.de>
  Date:   2014-12-16 (Tue, 16 Dec 2014)

  Changed paths:
    M src/ew_input.hpp

  Log Message:
  -----------
  adding default CP-violating Majorana phases


  Commit: b2ef7e23bc0c6932a64694ba4ae9dd87298860e5
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/b2ef7e23bc0c6932a64694ba4ae9dd87298860e5
  Author: Alexander Voigt <Alexander.Voigt at desy.de>
  Date:   2014-12-16 (Tue, 16 Dec 2014)

  Changed paths:
    M src/pmns.cpp
    M src/pmns.hpp

  Log Message:
  -----------
  extending PMNS struct by CP-violating Majorana phases


  Commit: d67440fc9376c09b1fe4590da6c41842d910aebd
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/d67440fc9376c09b1fe4590da6c41842d910aebd
  Author: Alexander Voigt <Alexander.Voigt at desy.de>
  Date:   2014-12-16 (Tue, 16 Dec 2014)

  Changed paths:
    M src/slha_io.cpp

  Log Message:
  -----------
  reading CP-violating Majorana phases from UPMNSIN block entries 5, 6


  Commit: 9f57da1a79131d1bcc8b0ada2fb8b9264b1932ac
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/9f57da1a79131d1bcc8b0ada2fb8b9264b1932ac
  Author: Alexander Voigt <Alexander.Voigt at desy.de>
  Date:   2014-12-17 (Wed, 17 Dec 2014)

  Changed paths:
    M templates/two_scale_low_scale_constraint.cpp.in
    M templates/two_scale_low_scale_constraint.hpp.in

  Log Message:
  -----------
  adding getters for the low-scale CKM and PMNS matrices


  Commit: 515f083fb1553cea171f0f15a26cc8ad20e0c767
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/515f083fb1553cea171f0f15a26cc8ad20e0c767
  Author: Alexander Voigt <Alexander.Voigt at desy.de>
  Date:   2014-12-17 (Wed, 17 Dec 2014)

  Changed paths:
    M test/test_CMSSMCKM_low_scale_constraint.cpp

  Log Message:
  -----------
  replace sparticleThresholdCorrections() by explicit low-energy constraint

This yields a much cleaner test result, because the same VEV is used
in both tests.


  Commit: 346107bc77280336eeb4a6fe4088f90625bad150
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/346107bc77280336eeb4a6fe4088f90625bad150
  Author: Alexander Voigt <Alexander.Voigt at desy.de>
  Date:   2014-12-17 (Wed, 17 Dec 2014)

  Changed paths:
    M model_files/CMSSMCKM/LesHouches.in.CMSSMCKM
    M model_files/MSSM/LesHouches.in.MSSM

  Log Message:
  -----------
  adding default CP-violating Majorana mixing angles to UPMNSIN block


  Commit: 4e34dd8262b8eb4a6d1dd17925333c4e4b3a05e3
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/4e34dd8262b8eb4a6d1dd17925333c4e4b3a05e3
  Author: Alexander Voigt <Alexander.Voigt at desy.de>
  Date:   2014-12-17 (Wed, 17 Dec 2014)

  Changed paths:
    M model_files/CMSSMCKM/FlexibleSUSY.m.in

  Log Message:
  -----------
  simplify low-scale constraint for bottom quarks and charged leptons


  Commit: 6d56ae54f4721ffba892186b2a5686d6cb5211e4
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/6d56ae54f4721ffba892186b2a5686d6cb5211e4
  Author: Alexander Voigt <Alexander.Voigt at desy.de>
  Date:   2015-02-10 (Tue, 10 Feb 2015)

  Changed paths:
    M .gitattributes
    M ChangeLog
    M README
    M TODO
    M config/Makefile.in
    M config/flexiblesusy-config.in
    A config/print_slha_block.awk
    M configure
    A createaddon
    M createmodel
    M doc/flexiblesusy-paper.tex
    M doc/release
    M examples/customized-betas/LesHouches.in.MSSMcbs
    M examples/customized-betas/MSSMcbs_spectrum_generator.hpp
    M examples/customized-betas/custombetas.cpp
    M examples/tower/LesHouches.in.tower
    M examples/tower/MSSMD5O_MSSMRHN_spectrum_generator.hpp
    M examples/tower/run_tower.cpp
    M install-sarah
    M legacy/conversion.cpp
    M legacy/conversion.hpp
    M meta/BetaFunction.m
    M meta/CConversion.m
    M meta/Constraint.m
    M meta/EWSB.m
    M meta/FlexibleSUSY.m
    M meta/LoopMasses.m
    M meta/Parameters.m
    M meta/SelfEnergies.m
    M meta/ThresholdCorrections.m
    M meta/TreeMasses.m
    A meta/Utils.m
    M meta/WriteOut.m
    M model_files/CMSSM/FlexibleSUSY.m.in
    M model_files/CMSSM/LesHouches.in.CMSSM
    A model_files/CMSSMFPIAbsolute/FlexibleSUSY.m.in
    A model_files/CMSSMFPIRelative/FlexibleSUSY.m.in
    A model_files/CMSSMFPITadpole/FlexibleSUSY.m.in
    A model_files/CMSSMGSLBroyden/FlexibleSUSY.m.in
    A model_files/CMSSMGSLHybrid/FlexibleSUSY.m.in
    A model_files/CMSSMGSLHybridS/FlexibleSUSY.m.in
    A model_files/CMSSMGSLNewton/FlexibleSUSY.m.in
    A model_files/CMSSMLowPrecision/FlexibleSUSY.m.in
    A model_files/CMSSMMassWInput/FlexibleSUSY.m.in
    M model_files/CMSSMNoFV/FlexibleSUSY.m.in
    M model_files/CMSSMNoFV/LesHouches.in.CMSSMNoFV
    M model_files/E6SSM/LesHouches.in.E6SSM
    M model_files/LHInputMSSM/FlexibleSUSY.m.in
    M model_files/LHInputMSSM/LesHouches.in.LHInputMSSM
    M model_files/MRSSM/LesHouches.in.MRSSM
    M model_files/MSSM/FlexibleSUSY.m.in
    M model_files/MSSM/LesHouches.in.MSSM
    M model_files/MSSMNoFV/FlexibleSUSY.m.in
    M model_files/MSSMNoFV/LesHouches.in.MSSMNoFV
    M model_files/MSSMNoFVatMGUT/FlexibleSUSY.m.in
    M model_files/MSSMNoFVatMGUT/LesHouches.in.MSSMNoFVatMGUT
    M model_files/MSSMatMGUT/FlexibleSUSY.m.in
    M model_files/MSSMatMGUT/LesHouches.in.MSSMatMGUT
    M model_files/NMSSM/LesHouches.in.NMSSM
    M model_files/NSM/LesHouches.in.NSM
    A model_files/NUHMNMSSM/FlexibleSUSY.m.in
    A model_files/NUHMNMSSM/LesHouches.in.NUHMNMSSM
    M model_files/NUHMSSM/LesHouches.in.NUHMSSM
    A model_files/NUTNMSSM/FlexibleSUSY.m.in
    A model_files/NUTNMSSM/LesHouches.in.NUTNMSSM_1308.1333_BP1
    A model_files/NUTNMSSM/LesHouches.in.NUTNMSSM_1308.1333_BP2
    A model_files/NUTNMSSM/LesHouches.in.NUTNMSSM_1308.1333_BP3
    M model_files/SM/FlexibleSUSY.m.in
    A model_files/SM/LesHouches.in.SM
    M model_files/SMSSM/FlexibleSUSY.m.in
    M model_files/TMSSM/FlexibleSUSY.m.in
    A model_files/TMSSM/LesHouches.in.TMSSM
    M model_files/UMSSM/LesHouches.in.UMSSM
    M model_files/lowMSSM/FlexibleSUSY.m.in
    M model_files/lowMSSM/LesHouches.in.lowMSSM
    M model_files/munuSSM/LesHouches.in.munuSSM
    M models/SoftsusyMSSM/module.mk
    M models/SoftsusyMSSM/softsusy.cpp
    M models/SoftsusyMSSM/softsusy.h
    M models/SoftsusyNMSSM/module.mk
    M models/SoftsusyNMSSM/nmssmUtils.cpp
    M models/SoftsusyNMSSM/nmssmUtils.h
    M models/SoftsusyNMSSM/nmssmsoftsusy.cpp
    M models/SoftsusyNMSSM/nmssmsoftsusy.h
    A release/generate-models.sh
    A src/compare.hpp
    M src/def.cpp
    M src/def.h
    M src/error.hpp
    M src/ew_input.hpp
    A src/ewsb_solver.hpp
    A src/fixed_point_iterator.hpp
    M src/linalg.cpp
    M src/linalg2.hpp
    M src/lowe.cpp
    M src/lowe.h
    M src/minimizer.hpp
    M src/module.mk
    M src/problems.hpp
    M src/pv.hpp
    M src/rk.cpp
    M src/rk.hpp
    M src/root_finder.hpp
    M src/slha_io.cpp
    M src/slha_io.hpp
    M src/spectrum_generator_settings.cpp
    M src/spectrum_generator_settings.hpp
    M src/two_scale_model.hpp
    M src/two_scale_solver.cpp
    M src/two_scale_solver.hpp
    A src/weinberg_angle.cpp
    A src/weinberg_angle.hpp
    M src/wrappers.cpp
    M src/wrappers.hpp
    M templates/low_scale_spectrum_generator.hpp.in
    A templates/module.addon.mk.in
    M templates/module.mk.in
    M templates/run.cpp.in
    M templates/run_cmd_line.cpp.in
    M templates/scan.cpp.in
    M templates/slha_io.cpp.in
    M templates/slha_io.hpp.in
    M templates/spectrum_generator.hpp.in
    M templates/two_scale_high_scale_constraint.cpp.in
    M templates/two_scale_high_scale_constraint.hpp.in
    M templates/two_scale_low_scale_constraint.cpp.in
    M templates/two_scale_low_scale_constraint.hpp.in
    M templates/two_scale_model.cpp.in
    M templates/two_scale_model.hpp.in
    M test/module.mk
    A test/run_cmd.cpp
    A test/run_cmd.hpp
    M test/test_CMSSM.hpp
    A test/test_CMSSMLowPrecision.cpp
    A test/test_CMSSMMassWInput_spectrum.cpp
    A test/test_CMSSM_like.hpp
    M test/test_CMSSM_model.cpp
    A test/test_CMSSM_profile.sh
    M test/test_CMSSM_slha_doubled_blocks.sh
    M test/test_CMSSM_spectrum.cpp
    M test/test_CMSSM_susy_scale_constraint.cpp
    A test/test_CMSSM_weinberg_angle.cpp
    M test/test_NMSSM.hpp
    M test/test_NMSSM_ewsb.cpp
    M test/test_NMSSM_initial_guesser.cpp
    M test/test_NMSSM_one_loop_spectrum.cpp
    M test/test_NMSSM_self_energies.cpp
    M test/test_NMSSM_spectrum.cpp
    M test/test_NMSSM_susy_scale_constraint.cpp
    A test/test_NUTNMSSM.hpp
    A test/test_NUTNMSSM.sh
    A test/test_NUTNMSSM_spectrum.cpp
    M test/test_Parameters.m
    A test/test_SM.hpp
    M test/test_SMSSM_ewsb.cpp
    M test/test_SMSSM_one_loop_spectrum.cpp
    A test/test_SM_weinberg_angle.cpp
    M test/test_benchmark.cpp
    A test/test_compare_ewsb_solvers.cpp
    A test/test_compare_ewsb_solvers.in.spc.in
    A test/test_ewsb_solver.cpp
    A test/test_fixed_point_iterator.cpp
    M test/test_minimizer.cpp
    M test/test_wrappers.cpp

  Log Message:
  -----------
  Merge branch 'development' into feature-ckm

Conflicts:
	meta/FlexibleSUSY.m
	src/ew_input.hpp
	src/lowe.cpp
	src/lowe.h
	src/slha_io.cpp
	src/slha_io.hpp
	src/wrappers.hpp
	templates/two_scale_low_scale_constraint.cpp.in
	templates/two_scale_low_scale_constraint.hpp.in
	test/module.mk


  Commit: 2d1069c7e82b3205d709f618fe5aa53c8f144c5b
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/2d1069c7e82b3205d709f618fe5aa53c8f144c5b
  Author: Alexander Voigt <alexander.voigt at desy.de>
  Date:   2015-04-17 (Fri, 17 Apr 2015)

  Changed paths:
    M .gitattributes
    M .gitignore
    M AUTHORS
    M BUGS
    M ChangeLog
    M README
    M config/flexiblesusy-config.in
    M config/module.mk
    M config/references
    A config/remove_slha_block.awk
    M configure
    M createaddon
    M createmodel
    M doc/flexiblesusy-paper.tex
    M doc/mainpage.dox.in
    M doc/release
    M examples/customized-betas/LesHouches.in.MSSMcbs
    M examples/customized-betas/MSSMcbs_spectrum_generator.hpp
    M examples/customized-betas/MSSMcbs_two_scale_initial_guesser.cpp
    M examples/customized-betas/MSSMcbs_two_scale_initial_guesser.hpp
    M examples/customized-betas/MSSMcbs_two_scale_low_scale_constraint.cpp
    M examples/customized-betas/MSSMcbs_two_scale_low_scale_constraint.hpp
    M examples/tower/LesHouches.in.tower
    M examples/tower/MSSMD5O_MSSMRHN_spectrum_generator.hpp
    M install-sarah
    M meta/AnomalousDimension.m
    M meta/CConversion.m
    M meta/ConvergenceTester.m
    M meta/EWSB.m
    M meta/FlexibleSUSY.m
    M meta/LoopMasses.m
    M meta/Parameters.m
    M meta/SelfEnergies.m
    M meta/ThresholdCorrections.m
    M meta/TreeMasses.m
    M meta/Utils.m
    M meta/WeinbergAngle.m
    M meta/WriteOut.m
    M model_files/CMSSM/FlexibleSUSY.m.in
    M model_files/CMSSM/LesHouches.in.CMSSM
    A model_files/CMSSMConvergenceTester/FlexibleSUSY.m.in
    A model_files/CMSSMHighPrecision/FlexibleSUSY.m.in
    A model_files/CMSSMMediumPrecision/FlexibleSUSY.m.in
    M model_files/CMSSMNoFV/FlexibleSUSY.m.in
    M model_files/CMSSMNoFV/LesHouches.in.CMSSMNoFV
    M model_files/E6SSM/FlexibleSUSY.m.in
    M model_files/E6SSM/LesHouches.in.E6SSM
    M model_files/InertMSSM/FlexibleSUSY.m.in
    M model_files/LHInputMSSM/LesHouches.in.LHInputMSSM
    M model_files/MRSSM/FlexibleSUSY.m.in
    M model_files/MRSSM/LesHouches.in.MRSSM
    M model_files/MSSM/FlexibleSUSY.m.in
    M model_files/MSSM/LesHouches.in.MSSM
    M model_files/MSSMD5O/FlexibleSUSY.m.in
    M model_files/MSSMNoFV/FlexibleSUSY.m.in
    M model_files/MSSMNoFV/LesHouches.in.MSSMNoFV
    M model_files/MSSMNoFVatMGUT/FlexibleSUSY.m.in
    M model_files/MSSMNoFVatMGUT/LesHouches.in.MSSMNoFVatMGUT
    M model_files/MSSMRHN/FlexibleSUSY.m.in
    M model_files/MSSMatMGUT/FlexibleSUSY.m.in
    M model_files/MSSMatMGUT/LesHouches.in.MSSMatMGUT
    M model_files/NMSSM/FlexibleSUSY.m.in
    M model_files/NMSSM/LesHouches.in.NMSSM
    M model_files/NSM/FlexibleSUSY.m.in
    M model_files/NSM/LesHouches.in.NSM
    M model_files/NUHMNMSSM/FlexibleSUSY.m.in
    M model_files/NUHMNMSSM/LesHouches.in.NUHMNMSSM
    M model_files/NUHMSSM/FlexibleSUSY.m.in
    M model_files/NUHMSSM/LesHouches.in.NUHMSSM
    M model_files/NUTNMSSM/FlexibleSUSY.m.in
    M model_files/NUTNMSSM/LesHouches.in.NUTNMSSM_1308.1333_BP1
    M model_files/NUTNMSSM/LesHouches.in.NUTNMSSM_1308.1333_BP2
    M model_files/NUTNMSSM/LesHouches.in.NUTNMSSM_1308.1333_BP3
    M model_files/SM/FlexibleSUSY.m.in
    M model_files/SM/LesHouches.in.SM
    A model_files/SMHighPrecision/FlexibleSUSY.m.in
    M model_files/SMSSM/FlexibleSUSY.m.in
    A model_files/SMSSM/LesHouches.in.SMSSM
    A model_files/THDMII/FlexibleSUSY.m.in
    A model_files/THDMII/LesHouches.in.THDMII
    M model_files/TMSSM/FlexibleSUSY.m.in
    M model_files/TMSSM/LesHouches.in.TMSSM
    M model_files/UMSSM/FlexibleSUSY.m.in
    M model_files/UMSSM/LesHouches.in.UMSSM
    A model_files/UnbrokenMSSM/FlexibleSUSY.m.in
    M model_files/YukawaCMSSM/FlexibleSUSY.m.in
    M model_files/lowMSSM/FlexibleSUSY.m.in
    M model_files/lowMSSM/LesHouches.in.lowMSSM
    A model_files/lowNMSSM/FlexibleSUSY.m.in
    A model_files/lowNMSSM/LesHouches.in.lowNMSSM
    A model_files/lowNMSSM/TP1_1loop.in
    A model_files/lowNMSSM/TP1_2loop_alphaS.in
    A model_files/lowNMSSM/TP1_2loop_full.in
    A model_files/lowNMSSM/TP2_1loop.in
    A model_files/lowNMSSM/TP2_2loop_alphaS.in
    A model_files/lowNMSSM/TP2_2loop_full.in
    M model_files/munuSSM/FlexibleSUSY.m.in
    M model_files/munuSSM/LesHouches.in.munuSSM
    M models/SoftsusyMSSM/mssmUtils.cpp
    M models/SoftsusyMSSM/softsusy.cpp
    M models/SoftsusyMSSM/softsusy.h
    M models/SoftsusyNMSSM/run_softpoint.cpp
    M models/SoftsusyNMSSM/run_softpoint.h
    M release/generate-models.sh
    A sarah/UnbrokenMSSM/UnbrokenMSSM.m
    A sarah/UnbrokenMSSM/parameters.m
    A sarah/UnbrokenMSSM/particles.m
    M src/coupling_monitor.hpp
    A src/eigen_utils.hpp
    M src/fixed_point_iterator.hpp
    A src/functors.hpp
    R src/higgs_2loop_corrections.hpp
    M src/lowe.cpp
    M src/minimizer.hpp
    M src/module.mk
    M src/numerics.cpp
    M src/numerics.h
    M src/problems.hpp
    M src/pv.cpp
    M src/root_finder.hpp
    M src/spectrum_generator_settings.cpp
    M src/spectrum_generator_settings.hpp
    A src/two_loop_corrections.hpp
    M src/two_scale_solver.cpp
    M src/two_scale_solver.hpp
    M src/weinberg_angle.cpp
    M src/weinberg_angle.hpp
    M src/wrappers.hpp
    M templates/info.cpp.in
    M templates/info.hpp.in
    M templates/low_scale_spectrum_generator.hpp.in
    M templates/run.cpp.in
    M templates/spectrum_generator.hpp.in
    M templates/start.m.in
    M templates/two_scale_convergence_tester.cpp.in
    M templates/two_scale_high_scale_constraint.cpp.in
    M templates/two_scale_high_scale_constraint.hpp.in
    M templates/two_scale_initial_guesser.cpp.in
    M templates/two_scale_initial_guesser.hpp.in
    M templates/two_scale_initial_guesser_low_scale_model.cpp.in
    M templates/two_scale_initial_guesser_low_scale_model.hpp.in
    M templates/two_scale_low_scale_constraint.cpp.in
    M templates/two_scale_low_scale_constraint.hpp.in
    M templates/two_scale_model.cpp.in
    M templates/two_scale_model.hpp.in
    M templates/two_scale_susy_scale_constraint.cpp.in
    M templates/two_scale_susy_scale_constraint.hpp.in
    M test/module.mk
    R test/remove_input_blocks.awk
    M test/test_CMSSMMassWInput_spectrum.cpp
    M test/test_CMSSMNoFV.hpp
    M test/test_CMSSMNoFV_low_scale_constraint.cpp
    A test/test_CMSSMNoFV_two_loop_spectrum.cpp
    A test/test_CMSSM_benchmark.cpp
    A test/test_CMSSM_benchmark.in.spc.in
    A test/test_CMSSM_beta_function_benchmark.cpp
    M test/test_CMSSM_high_scale_constraint.cpp
    M test/test_CMSSM_initial_guesser.cpp
    M test/test_CMSSM_low_scale_constraint.cpp
    A test/test_CMSSM_memory_leaks.sh
    M test/test_CMSSM_slha_output.cpp
    M test/test_CMSSM_slha_output.in.spc
    M test/test_CMSSM_spectrum.cpp
    M test/test_CMSSM_susy_scale_constraint.cpp
    A test/test_CMSSM_two_loop_spectrum.cpp
    M test/test_EWSB.m
    A test/test_NMSSM_benchmark.cpp
    A test/test_NMSSM_benchmark.in.spc.in
    M test/test_NMSSM_beta_functions.cpp
    M test/test_NMSSM_high_scale_constraint.cpp
    M test/test_NMSSM_initial_guesser.cpp
    M test/test_NMSSM_low_scale_constraint.cpp
    A test/test_NMSSM_profile.sh
    A test/test_NMSSM_slha_output.cpp
    A test/test_NMSSM_slha_output.in.spc
    M test/test_NMSSM_spectrum.cpp
    M test/test_NMSSM_susy_scale_constraint.cpp
    M test/test_NSM_low_scale_constraint.cpp
    M test/test_NUTNMSSM_spectrum.cpp
    M test/test_SM.hpp
    A test/test_SMHighPrecision_two_loop_spectrum.cpp
    M test/test_SM_low_scale_constraint.cpp
    A test/test_SM_one_loop_spectrum.cpp
    A test/test_SM_tree_level_spectrum.cpp
    A test/test_SM_two_loop_spectrum.cpp
    M test/test_SM_weinberg_angle.cpp
    M test/test_Vertices.m
    R test/test_benchmark.cpp
    R test/test_benchmark.in.spc.in
    M test/test_compare_ewsb_solvers.in.spc.in
    A test/test_eigen_utils.cpp
    M test/test_goldstones.cpp
    M test/test_lowMSSM.sh
    A test/test_numerics.cpp
    M test/test_pv.cpp
    A test/test_run_all_spectrum_generators.sh
    M test/test_wrappers.cpp

  Log Message:
  -----------
  Merge branch 'development' into feature-ckm

Conflicts:
	meta/FlexibleSUSY.m
	meta/WriteOut.m
	src/wrappers.hpp


  Commit: 75195b685fdaebd0e9f1d80faea552ba7433898a
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/75195b685fdaebd0e9f1d80faea552ba7433898a
  Author: Alexander Voigt <alexander.voigt at desy.de>
  Date:   2015-04-17 (Fri, 17 Apr 2015)

  Changed paths:
    M src/wrappers.hpp

  Log Message:
  -----------
  fix conflict in wrappers


  Commit: aa49591b225f148f85d9fe8ab393dd8c8b429c77
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/aa49591b225f148f85d9fe8ab393dd8c8b429c77
  Author: Alexander Voigt <alexander.voigt at desy.de>
  Date:   2015-04-17 (Fri, 17 Apr 2015)

  Changed paths:
    M model_files/CMSSMCKM/FlexibleSUSY.m.in

  Log Message:
  -----------
  adding default model for the MSSMCKM


  Commit: a129362ccdb3e03f6d3604ebdd10d873ce8a8b54
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/a129362ccdb3e03f6d3604ebdd10d873ce8a8b54
  Author: Alexander Voigt <alexander.voigt at desy.de>
  Date:   2015-04-17 (Fri, 17 Apr 2015)

  Changed paths:
    M test/test_CMSSMCKM_high_scale_constraint.cpp
    M test/test_CMSSMCKM_low_scale_constraint.cpp

  Log Message:
  -----------
  adapt tests to the new interface


  Commit: 838aee05e8da7f0063a05f95a2a9ad56d39138cd
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/838aee05e8da7f0063a05f95a2a9ad56d39138cd
  Author: Alexander Voigt <alexander.voigt at desy.de>
  Date:   2015-04-17 (Fri, 17 Apr 2015)

  Changed paths:
    M test/test_run_all_spectrum_generators.sh

  Log Message:
  -----------
  run CMSSMCKM for testing


Compare: https://github.com/FlexibleSUSY/FlexibleSUSY/compare/2e65ed95be7c...838aee05e8da


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